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Documentation

  • Requesting An Account
  • Cluster Specifications
    • Node Features (Constraints)
      • NVLink and NVSwitch
    • Node List
    • Partition List
      • Gypsum
    • Storage
  • Frequently Asked Questions
  • Connecting to Unity
    • SSH
    • Unity OnDemand
    • Connecting to Desktop VS Code
  • Managing Files
    • Command Line Interface (CLI)
    • Disk Quotas
    • FileZilla
    • Globus
    • Scratch: HPC Workspace
    • Unity OnDemand File Browser
  • Submitting Jobs
    • Batch Jobs
      • Array Batch Jobs
      • Large Job Counts
      • Monitor a batch job
    • Interactive CLI Jobs
    • Unity OnDemand
    • Message Passing Interface (MPI)
    • Slurm cheat sheet
  • Software Management
    • Conda
    • Modules
      • Module Usage
      • Module Hierarchy
    • Renv
    • Unity OnDemand
      • JupyterLab OnDemand
    • Venv
  • Tools & Software
    • ColabFold
    • R
      • R Parallelization
    • Unity GPUs
  • Datasets
    • AI and ML
      • Code Llama
      • Imagenet
      • Imagenet 1K
      • LAION
      • Llama2
      • mixtral
    • Bioinformatics
      • BFD/MGnify
      • Big Fantastic Database
      • ColabFoldDB
      • dfam
      • EggNOG
      • Kraken2
      • MGnify
      • NCBI BLAST databases
      • NCBI RefSeq database
      • PDB70
      • PDB70 for ColabFold
      • Protein Data Bank
      • Protein Data Bank database in mmCIF format
      • Protein Data Bank database in SEQRES records
      • Tara Oceans 18S amplicon
      • Tara Oceans MATOU gene catalog
      • Tara Oceans MGT transcriptomes
      • Uniclust30
      • UniProtKB
      • UniRef30
      • UniRef90
  • HPC Resources
  1. Unity
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  5. Tara Oceans MATOU gene catalog

Tara Oceans MATOU gene catalog

Path:/datasets/bio/tara-oceans/MATOU-gene-catalog
URL:https://www.genoscope.cns.fr/tara/localdata/data/Geneset-v1
Downloaded:2017-12-11
Cite:Carradec, Q., Pelletier, E., Da Silva, C., Alberti, A., Seeleuthner, Y., Blanc-Mathieu, R., Lima-Mendez, G., Rocha, F., Tirichine, L., Labadie, K., Kirilovsky, A., Bertrand, A., Engelen, S., Madoui, M. A., Méheust, R., Poulain, J., Romac, S., Richter, D. J., Yoshikawa, G., Dimier, C., … Wincker, P. (2018). A global ocean atlas of eukaryotic genes. Nature communications, 9(1), 373. https://doi.org/10.1038/s41467-017-02342-1
Bibtex:
@article{Carradec2018,title = {A global ocean atlas of eukaryotic genes},volume = {9},ISSN = {2041-1723},url = {http://dx.doi.org/10.1038/s41467-017-02342-1},DOI = {10.1038/s41467-017-02342-1},number = {1},journal = {Nature Communications},publisher = {Springer Science and Business Media LLC},author = {Carradec,  Quentin and Pelletier,  Eric and Da Silva,  Corinne and Alberti,  Adriana and Seeleuthner,  Yoann and Blanc-Mathieu,  Romain and Lima-Mendez,  Gipsi and Rocha,  Fabio and Tirichine,  Leila and Labadie,  Karine and Kirilovsky,  Amos and Bertrand,  Alexis and Engelen,  Stefan and Madoui,  Mohammed-Amin and Méheust,  Raphaël and Poulain,  Julie and Romac,  Sarah and Richter,  Daniel J. and Yoshikawa,  Genki and Dimier,  Céline and Kandels-Lewis,  Stefanie and Picheral,  Marc and Searson,  Sarah and Acinas,  Silvia G. and Boss,  Emmanuel and Follows,  Michael and Gorsky,  Gabriel and Grimsley,  Nigel and Karp-Boss,  Lee and Krzic,  Uros and Pesant,  Stephane and Reynaud,  Emmanuel G. and Sardet,  Christian and Sieracki,  Mike and Speich,  Sabrina and Stemmann,  Lars and Velayoudon,  Didier and Weissenbach,  Jean and Jaillon,  Olivier and Aury,  Jean-Marc and Karsenti,  Eric and Sullivan,  Matthew B. and Sunagawa,  Shinichi and Bork,  Peer and Not,  Fabrice and Hingamp,  Pascal and Raes,  Jeroen and Guidi,  Lionel and Ogata,  Hiroyuki and de Vargas,  Colomban and Iudicone,  Daniele and Bowler,  Chris and Wincker,  Patrick},year = {2018},month = jan}
Last modified: Thursday, September 5, 2024 at 4:00 PM. See the commit on GitLab.
University of Massachusetts Amherst University of Massachusetts Amherst University of Rhode Island University of Rhode Island University of Massachusetts Dartmouth University of Massachusetts Dartmouth University of Massachusetts Lowell University of Massachusetts Lowell University of Massachusetts Boston University of Massachusetts Boston Mount Holyoke College Mount Holyoke College
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